Author year (n) | Country | Study design | Total number of samples (N) | Reference test: culture | Index test: RT-PCR | Target sequence | |
---|---|---|---|---|---|---|---|
PTB | EPTB | ||||||
Bates et al. (2013) [36] | Zambia-(L) | Prospective-descriptive | 142 | Â | Liquid culture (MGIT) | RT-PCR Xpert MTB/RIF | rpoB probe |
Bates et al. (2013) [36] | Zambia-(L) | Prospective-descriptive | Â | 788 | Liquid culture (MGIT) | RT-PCR Xpert MTB/RIF | rpoB probe |
Chipinduro et al. (2017) [37] | Zimbabwe-(L) | A cross-sectional | Â | 222 (stool) | LJ | RT-PCR Xpert MTB/RIF | rpoB probe |
El Khechine et al. (2009) [38] | France-(U) | Diagnostic case-control | – | 134 | BACTEC 9000 MB LJ | RT-PCR(MX3000) | IS6110 gene |
Gous et al. (2015) [39] | South Africa-(U) | Prospective | 345 | – | Liquid culture (MGIT) | RT-PCR Xpert MTB/RIF | rpoB probe |
LaCourse et al. (2014) [40] | Malawi-(L) | Cross-sectional study | 300 | – | Bactec MGIT, BD) | RT-PCR Xpert MTB/RIF | rpoB probe |
Memon et al. (2018) [41] | India-(L) | Diagnostic accuracy study | – | 100 | Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |
Mesman et al. (2019) [42] | Peru-(U) | Cohort study | Â | 259(stool) | BACTEC 9000 MB LJ | TruTip Mtb DNA | IS6110 real-time PCR |
Nhu et al. (2013) [43] | Vietnam-(L) | Prospective | Â | 96 | MGIT, Becton Dickinson) | RT-PCR Xpert MTB/RIF | rpoB probe |
Nicol et al. (2011) [44] | South Africa-(U) | Prospective-descriptive | 452 | – | Liquid culture | RT-PCR Xpert MTB/RIF | rpoB probe |
Nicol et al. (2013) [45] | South Africa-(U) | Prospective | – | 115 | Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |
Nicol et al. (2018) [46] | South Africa-(U) | Cohort study | 367 | – | MGIT, Becton Dickinson) | RT-PCR Xpert MTB/RIF | rpoB probe |
Oberhelman et al. (2010) [47] | Peru-(U) | Prospective case-control study | Â | 218 (stool, GA, etc.) | LJ culture | hemi-nested IS6110 PCR | IS6110 PCR |
Qing-Qin Yin et al. (2014) [48] | China-(U) | Prospective | 255 | Â | Solid (LJ) and Liquid culture (Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |
Rachow et al. (2012) [49] | Tanzania-(L) | Prospective cohort study | 164 | – | Solid (LJ) and Liquid culture (Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |
Sekadde et al. (2013) [50] | Uganda-(L) | Cross-sectional diagnostic study | 235 | – | Solid (LJ) and Liquid culture (Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |
Walters et al. (2017) [51] | South Africa-(U) | Prospective | Â | 379 (stool) | BACTEC 9000 MB | RT-PCR Xpert MTB/RIF | rpoB probe |
Wang et al. (2013) [52] | China-(U) | Retrospective | 30 | – | Bact/Alert 3D | LightCycler® 480 (Roche) |  |
Wolf et al. (2008) [53] | Peru-(U) | Diagnostic accuracy study | – | 16 (6+) (stool) |  | hemi-nested IS6110 PCR | IS6110 PCR |
Zar et al. (2012) [54] | South Africa-(U) | Prospective | 535 | – | Liquid culture (MGIT) | RT-PCR Xpert MTB/RIF | rpoB probe |
Zar et al. (2013) [55] | South Africa-(U) | Prospective study | 384 | – | Bactec MGIT 960 | RT-PCR Xpert MTB/RIF | rpoB probe |